We have a new paper out! This post is to describe what our paper is about. The paper is free to read, so please take a look if you are interested. Gabrielle Larocque, Daniel J. Moore, Méghane Sittewelle, Cansu Kuey, Joseph H.R. Hetmanski, Penelope J. La-Borde, Beverley J. Wilson, Nicholas I. Clarke, Patrick T. Caswell […]
Tag: papers
Methods papers for MD997 – 2021 Edition
It is an annual event on quantixed to post the papers I have selected for MD997 Frontier Techniques and Research Skills in Biomedicine. Previous selections are grouped here. The deal is that each student picks a paper from the list and then uses it to write a “grant application” for a research project. They also […]
Methods papers for MD997 – 2020 edition
I run a Masters module called MD997. Over six weeks, students have to write a grant proposal and then assess their peers’ proposals at a mock grant panel. Each student bases their proposal on a paper. They present that paper to the class and then they write their proposal using the paper as a springboard. […]
Ferrous: new paper on FerriTagging proteins in cells
We have a new paper out. It’s not exactly news, because the paper has been up on bioRxiv since December 2016 and hasn’t changed too much. All of the work was done by Nick Clarke when he was a PhD student in the lab. This post is to explain our new paper to a general […]
Methods papers for MD997
I am now running a new module for masters students, MD997. The aim is to introduce the class to a range of advanced research methods and to get them to think about how to formulate their own research question(s). The module is built around a paper which is allocated in the first session. I had […]
Start Me Up: Endocytosis on demand
We have a new paper out. The title is New tools for ‘hot-wiring’ clathrin-mediated endocytosis with temporal and spatial precision. You can read it here. Cells have a plasma membrane which is the barrier between the cell’s interior and the outside world. In order to import material from outside, cells have a special process called […]
The Digital Cell: Workflow
The future of cell biology, even for small labs, is quantitative and computational. What does this mean and what should it look like? My group is not there yet, but in this post I’ll describe where we are heading. The graphic below shows my current view of the ideal workflow for my lab. The graphic is pretty self-explanatory, but […]
Voice Your Opinion: Editors shopping for preprints is the future
Today I saw a tweet from Manuel Théry (an Associate Ed at Mol Biol Cell). Which said that he heard that the Editor-in-Chief of MBoC, David Drubin shops for interesting preprints on bioRxiv to encourage the authors to submit to MBoC. This is not a surprise to me. I’ve read that authors of preprints on bioRxiv […]
A Day In The Life III
This year #paperOTD (or paper of the day for any readers not on Twitter) did not go well for me. I’ve been busy with lots of things and I’m now reviewing more grants than last year because I am doing more committee work. This means I am finding less time to read one paper per day. […]
The Great Curve: Citation distributions
This post follows on from a previous post on citation distributions and the wrongness of Impact Factor. Stephen Curry had previously made the call that journals should “show us the data” that underlie the much-maligned Journal Impact Factor (JIF). However, this call made me wonder what “showing us the data” would look like and how journals might […]